Gene: Pp3c24_18220
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c24_18220
- Transcript Identifier Pp3c24_18220V3.1
- Gene Type Coding gene
- Location Chr24 : 12220824-12221817 : negative
Gene Family Information
- ID HOM05D001926
- #Genes/#Species 343/98
- Phylogenetic origin
- ID ORTHO05D002121
- #Genes/#Species 315/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c24_18220V3.1
- pacid 32910963
- alias Phypa_172596
- alias Pp1s365_30V6
- alias Phpat.024G065400
- uniprot A9TXW9
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IBA | GOA Database | rRNA processing | |
| GO:0042274 | IBA | GOA Database | ribosomal small subunit biogenesis | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G16130 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT5G16130 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G16130 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G16130 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G16130 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT1G48830 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G16130 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G16130 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G02560 |
| GO:0022627 | IBA | GOA Database | cytosolic small ribosomal subunit | |
| GO:0032040 | IBA | GOA Database | small-subunit processome | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000554 | Ribosomal protein S7e |
| Mapman id | Description |
|---|---|
| 17.1.3.1.8 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS7 |