Gene: Pp3c23_9010

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_9010
  • Transcript Identifier Pp3c23_9010V3.1
  • Gene Type Coding gene
  • Location Chr23 : 6243040-6249910 : negative

Gene Family Information

  • ID HOM05D000140
  • #Genes/#Species 2610/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_9010V3.1
  • pacid 32950595
  • alias Phypa_175047
  • alias Pp1s10_144V6
  • alias Phpat.023G028200
  • uniprot A0A2K1IIL5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT5G63810
GO:0048354
ISO
PLAZA Integrative Orthologymucilage biosynthetic process involved in seed coat development AT5G63800
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT5G63800
GO:0016579
IBA
GOA Databaseprotein deubiquitination
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
GOA Databasethiol-dependent deubiquitinase
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0004565
IEA
GOA Databasebeta-galactosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G32810
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT3G13750
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT2G32810
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G63800
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT4G26140
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G13750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008979 Galactose-binding-like domain superfamily
IPR031330 Glycoside hydrolase 35, catalytic domain
IPR041392 Beta-galactosidase, beta-sandwich domain
IPR000922 D-galactoside/L-rhamnose binding SUEL lectin domain
IPR043159 D-galactoside/L-rhamnose binding SUEL lectin domain superfamily
IPR001944 Glycoside hydrolase, family 35
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
21.3.2.2.3 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL)