Gene: Pp3c23_17770

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_17770
  • Transcript Identifier Pp3c23_17770V3.1
  • Gene Type Coding gene
  • Location Chr23 : 11759288-11761890 : positive

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_17770V3.1
  • pacid 32950622
  • alias Phpat.023G063000
  • alias Pp1s222_25V6
  • uniprot A0A2K1IJU6

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071470
ISO
PLAZA Integrative Orthologycellular response to osmotic stress AT2G47900
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G47900
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G18680
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G53320
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT3G06380
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT2G47900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G06380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G53320
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G53320
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G18680
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G53320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036047 F-box-like domain superfamily
IPR025659 Tubby-like, C-terminal
IPR000007 Tubby, C-terminal
IPR001810 F-box domain
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)