Gene: Pp3c23_13420
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c23_13420
- Transcript Identifier Pp3c23_13420V3.3
- Gene Type Coding gene
- Location Chr23 : 8929462-8931014 : positive
Gene Family Information
- ID HOM05D000499
- #Genes/#Species 1066/97
- Phylogenetic origin
- ID ORTHO05D002036
- #Genes/#Species 325/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c23_13420V3.3
- pacid 32950930
- alias Pp1s294_28V6
- alias Phypa_197435
- alias Phpat.023G045700
- uniprot A0A2K1IJ74
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045491 | ISO | PLAZA Integrative Orthology | xylan metabolic process | AT1G28240 |
| GO:0080001 | ISO | PLAZA Integrative Orthology | mucilage extrusion from seed coat | AT1G28240 |
| GO:0048358 | ISO | PLAZA Integrative Orthology | mucilage pectin biosynthetic process | AT1G28240 |
| GO:0010246 | ISO | PLAZA Integrative Orthology | rhamnogalacturonan I biosynthetic process | AT1G28240 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016757 | ISO | PLAZA Integrative Orthology | glycosyltransferase activity | AT1G28240 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G28240 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006852 | Protein of unknown function DUF616 |
| Mapman id | Description |
|---|---|
| 21.3.2.2.5 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.glycosyltransferase (MUCI70) |