Gene: Pp3c20_6730

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_6730
  • Transcript Identifier Pp3c20_6730V3.2
  • Gene Type Coding gene
  • Location Chr20 : 4039708-4043868 : negative

Gene Family Information

  • ID HOM05D000554
  • #Genes/#Species 991/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_6730V3.2
  • pacid 32946960
  • alias Phpat.020G028100
  • alias Phypa_174867
  • alias Pp1s9_199V6
  • uniprot A0A2K1IUB0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0032436
IBA
GOA Databasepositive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0006511
IBA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G05880
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G05880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0031624
IBA
GOA Databaseubiquitin conjugating enzyme binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0000151
IBA
GOA Databaseubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR031127 E3 ubiquitin ligase RBR family
IPR002867 IBR domain
Mapman id Description
19.2.2.1.4.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Ariadne)