Gene: Pp3c20_6230

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_6230
  • Transcript Identifier Pp3c20_6230V3.3
  • Gene Type Coding gene
  • Location Chr20 : 3769782-3771921 : negative

Gene Family Information

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_6230V3.3
  • pacid 32945709
  • alias Pp1s9_162V6
  • alias Phpat.020G026600
  • alias Phypa_159064
  • uniprot A0A2K1IU89

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000118
IBA
GOA Databasehistone deacetylase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025718 Histone deacetylase complex subunit SAP30, Sin3 binding domain
IPR024145 Histone deacetylase complex subunit SAP30/SAP30-like
IPR011011 Zinc finger, FYVE/PHD-type
IPR038291 SAP30, C-terminal domain superfamily
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
Mapman id Description
12.3.2.1.1.2.4 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP30