Gene: Pp3c20_2940
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_2940
- Transcript Identifier Pp3c20_2940V3.2
- Gene Type Coding gene
- Location Chr20 : 1566350-1570147 : negative
Gene Family Information
- ID HOM05D000316
- #Genes/#Species 1459/98
- Phylogenetic origin
- ID ORTHO05D001978
- #Genes/#Species 330/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c20_2940V3.2
- pacid 32947786
- alias Phypa_138992
- alias Pp1s152_167V6
- alias Phpat.020G015200
- uniprot A0A2K1ITT8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0018258 | ISO | PLAZA Integrative Orthology | protein O-linked glycosylation via hydroxyproline | AT5G53340 |
| GO:0010405 | ISO | PLAZA Integrative Orthology | arabinogalactan protein metabolic process | AT5G53340 |
| GO:0006486 | IEA | GOA Database | protein glycosylation | |
| GO:0006486 | IEA | InterPro | protein glycosylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016758 | IEA | GOA Database | hexosyltransferase activity | |
| GO:0016758 | IEA | InterPro | hexosyltransferase activity | |
| GO:1990714 | ISO | PLAZA Integrative Orthology | hydroxyproline O-galactosyltransferase activity | AT5G53340 |
| GO:0008194 | IBA | GOA Database | UDP-glycosyltransferase activity | |
| GO:0008378 | IBA | GOA Database | galactosyltransferase activity | |
| GO:0016757 | IBA IEA | GOA Database | glycosyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G53340 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G53340 |
| GO:0000139 | IBA IEA | GOA Database | Golgi membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002659 | Glycosyl transferase, family 31 |
| Mapman id | Description |
|---|---|
| 18.1.2.1.2 | Protein modification.glycosylation.O-linked glycosylation.hydroxyproline O-linked glycosylation.hydroxyproline-O-galactosyltransferase (HPGT) |
| 21.4.1.1.5.2 | Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein activities.arabinogalactan protein glycosylation.hydroxyproline-O-galactosyltransferase (HPGT) |