Gene: Pp3c20_2160

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c20_2160
Transcript Identifier Pp3c20_2160V3.1
Gene Type Coding gene
Location Chr20 : 1189372-1192050 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000472
#Genes/#Species 1118/100
Phylogenetic origin

ID ORTHO05D000344
#Genes/#Species 1079/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

name Pp3c20_2160V3.1
pacid 32947856
alias Phpat.020G011800
alias Pp1s152_91V6
alias Phypa_190792
uniprot A0A2K1ITN9

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0071470	ISO	PLAZA Integrative Orthology	cellular response to osmotic stress	AT2G47900
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT2G47900
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT5G18680
GO:0009555	ISO	PLAZA Integrative Orthology	pollen development	AT1G53320
GO:0009620	ISO	PLAZA Integrative Orthology	response to fungus	AT3G06380
GO:0042542	ISO	PLAZA Integrative Orthology	response to hydrogen peroxide	AT2G47900

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT3G06380

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G53320
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G53320
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G18680
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT1G53320

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001810	F-box domain
IPR000007	Tubby, C-terminal
IPR025659	Tubby-like, C-terminal

Mapman id	Description
15.5.21	RNA biosynthesis.transcriptional regulation.transcription factor (TUB)