Gene: Pp3c20_20340

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_20340
  • Transcript Identifier Pp3c20_20340V3.2
  • Gene Type Coding gene
  • Location Chr20 : 13258905-13267262 : negative

Gene Family Information

  • ID HOM05D001653
  • #Genes/#Species 391/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_20340V3.2
  • pacid 32945768
  • alias Phypa_122471
  • alias Phpat.020G074300
  • alias Pp1s40_202V6
  • uniprot A0A2K1IVW9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006680
ISO
PLAZA Homology (enrichment)glucosylceramide catabolic process HOM05D001653
GO:0006665
ISO
PLAZA Integrative Orthologysphingolipid metabolic process AT4G10060

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422
IBA
GOA Databasebeta-glucosidase activity
GO:0004348
ISO
PLAZA Integrative Orthologyglucosylceramidase activity AT4G10060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D001653
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G49900
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT4G10060
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G33700
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G24180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008928 Six-hairpin glycosidase superfamily
IPR012341 Six-hairpin glycosidase-like superfamily
IPR006775 Glycosyl-hydrolase family 116, catalytic region
IPR024462 Glycosyl-hydrolase family 116, N-terminal
Mapman id Description
5.7.5.1 Lipid metabolism.lipid degradation.sphingolipid degradation.glucosylceramidase (GCD)