Gene: Pp3c20_16710

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c20_16710
  • Transcript Identifier Pp3c20_16710V3.1
  • Gene Type Coding gene
  • Location Chr20 : 10997777-11005997 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c20_16710V3.1
  • pacid 32946577
  • alias Pp1s44_156V6
  • alias Phypa_123454
  • alias Phpat.020G061400
  • uniprot A0A2K1IVI7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031936
IBA
GOA Databasenegative regulation of chromatin silencing
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G05910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0042393
IBA
GOA Databasehistone binding
GO:0003682
IBA
GOA Databasechromatin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001487 Bromodomain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036427 Bromodomain-like superfamily
IPR003959 ATPase, AAA-type, core
IPR041569 AAA ATPase, AAA+ lid domain
IPR003593 AAA+ ATPase domain
Mapman id Description
12.5.2.6.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.BRAT1-BRP1 anti-silencing regulator complex.component BRAT1