Gene: Pp3c20_12240
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c20_12240
- Transcript Identifier Pp3c20_12240V3.2
- Gene Type Coding gene
- Location Chr20 : 7815720-7819333 : negative
Gene Family Information
- ID HOM05D000086
- #Genes/#Species 3623/98
- Phylogenetic origin
- ID ORTHO05D000983
- #Genes/#Species 529/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c20_12240V3.2
- pacid 32946600
- alias Phpat.020G048600
- uniprot A0A2K1IV17
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IBA | GOA Database | protein ubiquitination | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G18650 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT4G30400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031625 | IBA | GOA Database | ubiquitin protein ligase binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G48030 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |