Gene: Pp3c1_27960
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_27960
- Transcript Identifier Pp3c1_27960V3.1
- Gene Type Coding gene
- Location Chr01 : 19964551-19965934 : positive
Gene Family Information
- ID HOM05D002099
- #Genes/#Species 318/96
- Phylogenetic origin
- ID ORTHO05D002080
- #Genes/#Species 319/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c1_27960V3.1
- pacid 32971552
- uniprot A0A2K1L9Z3
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034389 | IBA | GOA Database | lipid droplet organization | |
| GO:0010344 | ISO | PLAZA Integrative Orthology | seed oilbody biogenesis | AT5G16460 |
| GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT2G34380 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT5G16460 |
| GO:0080155 | ISO | PLAZA Integrative Orthology | regulation of double fertilization forming a zygote and endosperm | AT2G34380 |
| GO:0140042 | ISO | PLAZA Integrative Orthology | lipid droplet formation | AT2G34380 |
| GO:0010162 | ISO | PLAZA Integrative Orthology | seed dormancy process | AT2G34380 |
| GO:0019915 | IBA IEA | GOA Database | lipid storage | |
| GO:0019915 | IEA | InterPro | lipid storage | |
| GO:0006629 | IEA | GOA Database | lipid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G34380 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030176 | IBA | GOA Database | integral component of endoplasmic reticulum membrane | |
| GO:0005783 | IEA | GOA Database | endoplasmic reticulum | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005789 | IEA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009617 | Seipin family |
| Mapman id | Description |
|---|---|
| 5.9.1 | Lipid metabolism.lipid droplet-associated activities.lipid droplet biogenesis factor (SEIPIN) |