Gene: Pp3c1_24300

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_24300
  • Transcript Identifier Pp3c1_24300V3.2
  • Gene Type Coding gene
  • Location Chr01 : 17879014-17880721 : negative

Gene Family Information

  • ID HOM05D002016
  • #Genes/#Species 328/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_24300V3.2
  • pacid 32968331
  • alias Phypa_106052
  • alias Phpat.001G095900
  • alias Pp1s59_122V6
  • uniprot A9S9Y8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000027
IBA
GOA Databaseribosomal large subunit assembly
GO:0002181
IBA
GOA Databasecytoplasmic translation
GO:0006412
IEA
GOA Databasetranslation
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G18540
GO:0003735
IBA
IEA
GOA Databasestructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G18540
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G74060
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G18540
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G18540
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G18540
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G18540
GO:0022625
IBA
GOA Databasecytosolic large ribosomal subunit
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014722 Ribosomal protein L2, domain 2
IPR000915 60S ribosomal protein L6E
IPR008991 Translation protein SH3-like domain superfamily
IPR005568 Ribosomal protein L6, N-terminal
IPR041997 Ribosomal Protein L6, KOW domain
Mapman id Description
17.1.2.1.4 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL6