Gene: Pp3c1_2420

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c1_2420
  • Transcript Identifier Pp3c1_2420V3.1
  • Gene Type Coding gene
  • Location Chr01 : 1813148-1814609 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin
  • ID ORTHO05D319074
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c1_2420V3.1
  • pacid 32968551
  • alias Pp1s346_19V6
  • alias Phpat.001G009400
  • alias Phypa_34357
  • uniprot A0A2K1L6L3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008152
IEA
GOA Databasemetabolic process
GO:0042546
ISO
PLAZA Homology (enrichment)cell wall biogenesis HOM05D000066
GO:0010411
ISO
PLAZA Homology (enrichment)xyloglucan metabolic process HOM05D000066
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016762
IEA
GOA Databasexyloglucan:xyloglucosyl transferase activity
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044791 Beta-glucanase/XTH
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR000757 Glycoside hydrolase family 16
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase