Gene: Pp3c1_21000
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c1_21000
- Transcript Identifier Pp3c1_21000V3.1
- Gene Type Coding gene
- Location Chr01 : 15885016-15885639 : negative
Gene Family Information
- ID HOM05D000490
- #Genes/#Species 1087/98
- Phylogenetic origin
- ID ORTHO05D001398
- #Genes/#Species 415/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c1_21000V3.1
- pacid 32966983
- alias Pp1s257_28V6
- alias Phypa_196148
- alias Phpat.001G079100
- uniprot A9TL99
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | IBA | GOA Database | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G40380 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IBA IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IBA | GOA Database | Golgi apparatus | |
| GO:0005783 | IBA | GOA Database | endoplasmic reticulum | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT2G40380 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT2G40380 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G38360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004895 | Prenylated rab acceptor PRA1 |
| Mapman id | Description |
|---|---|
| 22.3.4.4.3.2 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein |