Gene: Pp3c18_6880

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_6880
  • Transcript Identifier Pp3c18_6880V3.12
  • Gene Type Coding gene
  • Location Chr18 : 4880014-4882108 : negative

Gene Family Information

  • ID HOM05D000794
  • #Genes/#Species 745/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_6880V3.12
  • pacid 32983023
  • alias Phypa_49171
  • alias Phpat.018G021900
  • alias Pp1s185_120V6
  • uniprot A0A2K1J068

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT2G42280
GO:0010629
ISO
PLAZA Integrative Orthologynegative regulation of gene expression AT2G43140
GO:0010119
ISO
PLAZA Integrative Orthologyregulation of stomatal movement AT1G51140
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT2G43140
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G42280
GO:0042335
ISO
PLAZA Integrative Orthologycuticle development AT1G51140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G51140
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51140
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G51140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G05805

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)