Gene: Pp3c18_5860

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_5860
  • Transcript Identifier Pp3c18_5860V3.1
  • Gene Type Coding gene
  • Location Chr18 : 4342452-4342985 : positive

Gene Family Information

  • ID HOM05D000440
  • #Genes/#Species 1177/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_5860V3.1
  • pacid 32981732
  • alias Phypa_192745
  • alias Pp1s185_21V6
  • alias Phpat.018G018600
  • uniprot A0A2K1J030

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G49210
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT2G17450
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT1G20823
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G35480
GO:0048443
ISO
PLAZA Integrative Orthologystamen development AT5G05280
GO:0010966
ISO
PLAZA Integrative Orthologyregulation of phosphate transport AT1G20823
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT1G20823
GO:0006513
ISO
PLAZA Integrative Orthologyprotein monoubiquitination AT2G17450
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT5G05280
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT5G05280
GO:0080141
ISO
PLAZA Integrative Orthologyregulation of jasmonic acid biosynthetic process AT5G05280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT1G49210
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G17450
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT2G17450

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G20823
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001841 Zinc finger, RING-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase