Gene: Pp3c18_340

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_340
  • Transcript Identifier Pp3c18_340V3.1
  • Gene Type Coding gene
  • Location Chr18 : 261164-263023 : negative

Gene Family Information

  • ID HOM05D000119
  • #Genes/#Species 2812/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_340V3.1
  • pacid 32982416
  • alias Pp1s151_41V6
  • alias Phypa_138897
  • alias Phpat.018G001300
  • uniprot A0A2K1IZI2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT1G73410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73410
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G73410

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)