Gene: Pp3c18_21020

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_21020
  • Transcript Identifier Pp3c18_21020V3.2
  • Gene Type Coding gene
  • Location Chr18 : 14818335-14822136 : negative

Gene Family Information

  • ID HOM05D003042
  • #Genes/#Species 226/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_21020V3.2
  • pacid 32983250
  • alias Phypa_161474
  • alias Phpat.018G070500
  • alias Pp1s33_129V6
  • uniprot A9RWT4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006405
IBA
GOA DatabaseRNA export from nucleus
GO:0000972
IBA
GOA Databasetranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0043130
IBA
GOA Databaseubiquitin binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IBA
GOA Databasenuclear pore
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G80670
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G80670
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT1G80670

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
13.3.4.5.2 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.checkpoint protein (BUB3)
23.5.1.1.1.9 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (RAE1)