Gene: Pp3c18_10000

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c18_10000
  • Transcript Identifier Pp3c18_10000V3.7
  • Gene Type Coding gene
  • Location Chr18 : 7097019-7098564 : positive

Gene Family Information

  • ID HOM05D003382
  • #Genes/#Species 203/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c18_10000V3.7
  • pacid 32982195
  • alias Pp1s19_221V6
  • alias Phypa_32848
  • alias Phpat.018G031800
  • uniprot A0A1B1IJJ8

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010246
ISO
PLAZA Integrative Orthologyrhamnogalacturonan I biosynthetic process AT4G36890
GO:0048354
ISO
PLAZA Integrative Orthologymucilage biosynthetic process involved in seed coat development AT4G36890
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT4G36890
GO:0045491
ISO
PLAZA Integrative Orthologyxylan metabolic process AT4G36890
GO:0045492
ISO
PLAZA Integrative Orthologyxylan biosynthetic process AT4G36890
GO:0048358
ISO
PLAZA Integrative Orthologymucilage pectin biosynthetic process AT4G36890
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT4G36890
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT4G36890
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT4G36890
GO:0005975
IBA
GOA Databasecarbohydrate metabolic process
GO:0009834
IBA
GOA Databaseplant-type secondary cell wall biogenesis
GO:0010417
IBA
GOA Databaseglucuronoxylan biosynthetic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042285
IBA
GOA Databasexylosyltransferase activity
GO:0047517
ISO
PLAZA Integrative Orthology1,4-beta-D-xylan synthase activity AT4G36890
GO:0015018
IEA
GOA Databasegalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015018
IEA
InterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016757
IEA
GOA Databaseglycosyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT4G36890
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G36890
GO:0000138
ISO
PLAZA Integrative OrthologyGolgi trans cisterna AT4G36890
GO:0000139
IBA
IEA
GOA DatabaseGolgi membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005027 Glycosyl transferase, family 43
IPR029044 Nucleotide-diphospho-sugar transferases
Mapman id Description
21.2.2.1.3.3 Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX14)