Gene: Pp3c17_6790
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c17_6790
- Transcript Identifier Pp3c17_6790V3.21
- Gene Type Coding gene
- Location Chr17 : 5181574-5183728 : negative
Gene Family Information
- ID HOM05D000707
- #Genes/#Species 812/95
- Phylogenetic origin
- ID ORTHO05D001462
- #Genes/#Species 403/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c17_6790V3.21
- pacid 32906358
- alias Phypa_118932
- alias Phpat.017G022800
- alias Pp1s26_5V6
- uniprot A0A2K1J2Z4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT3G21880 |
| GO:2000032 | ISO | PLAZA Integrative Orthology | regulation of secondary shoot formation | AT3G21880 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G68190 |
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | AT3G21880 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G07650 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc04g007470.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G21880 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G21880 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G48250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.2 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO) |