Gene: Pp3c17_22609
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c17_22609
- Transcript Identifier Pp3c17_22609V3.1
- Gene Type Coding gene
- Location Chr17 : 14816479-14817583 : negative
Gene Family Information
- ID HOM05D001905
- #Genes/#Species 345/94
- Phylogenetic origin
- ID ORTHO05D001820
- #Genes/#Species 350/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c17_22609V3.1
- pacid 32908533
- uniprot A0A2K1J540
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031146 | IBA | GOA Database | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | |
| GO:0006511 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent protein catabolic process | AT4G07400 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G67250 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019005 | IBA | GOA Database | SCF ubiquitin ligase complex | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G67250 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR032675 | Leucine-rich repeat domain superfamily |
| Mapman id | Description |
|---|---|
| 19.2.2.8.1.4.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX) |