Gene: Pp3c13_17240
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c13_17240
- Transcript Identifier Pp3c13_17240V3.3
- Gene Type Coding gene
- Location Chr13 : 12304499-12306090 : positive
Gene Family Information
- ID HOM05D002250
- #Genes/#Species 299/97
- Phylogenetic origin
- ID ORTHO05D002393
- #Genes/#Species 292/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c13_17240V3.3
- pacid 32930294
- alias Phypa_137985
- alias Phpat.013G058200
- alias Pp1s142_96V6
- uniprot A9SZH2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IBA IEA | GOA Database | intracellular protein transport | |
| GO:0061025 | ISO | PLAZA Integrative Orthology | membrane fusion | AT3G24350 |
| GO:0006906 | IBA | GOA Database | vesicle fusion | |
| GO:0006888 | IBA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0048278 | IBA | GOA Database | vesicle docking | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G05760 |
| GO:0005484 | IBA IEA | GOA Database | SNAP receptor activity | |
| GO:0000149 | IBA | GOA Database | SNARE binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009504 | ISO | PLAZA Integrative Orthology | cell plate | AT5G05760 |
| GO:0043231 | ISO | PLAZA Integrative Orthology | intracellular membrane-bounded organelle | AT5G05760 |
| GO:0000139 | IBA | GOA Database | Golgi membrane | |
| GO:0012505 | IBA | GOA Database | endomembrane system | |
| GO:0016021 | IBA IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0031201 | IBA | GOA Database | SNARE complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.1.3 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP3-group component |