Gene: Pp3c12_9180
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c12_9180
- Transcript Identifier Pp3c12_9180V3.2
- Gene Type Coding gene
- Location Chr12 : 6412343-6413485 : positive
Gene Family Information
- ID HOM05D000856
- #Genes/#Species 696/100
- Phylogenetic origin
- ID ORTHO05D001792
- #Genes/#Species 355/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c12_9180V3.2
- pacid 32973161
- alias Phpat.012G031100
- alias Pp1s91_124V6
- alias Phypa_131980
- uniprot A0A2K1JQ26
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000028 | IBA | GOA Database | ribosomal small subunit assembly | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G09510 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IEA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0022627 | IBA | GOA Database | cytosolic small ribosomal subunit | |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT5G09510 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT5G09510 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G09510 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT5G09510 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G09510 |
| GO:0015935 | IEA | GOA Database | small ribosomal subunit | |
| GO:0015935 | IEA | InterPro | small ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.3.1.16 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS15 |