Gene: Pp3c12_7940

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_7940
  • Transcript Identifier Pp3c12_7940V3.1
  • Gene Type Coding gene
  • Location Chr12 : 5551357-5553619 : positive

Gene Family Information

  • ID HOM05D002096
  • #Genes/#Species 318/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_7940V3.1
  • pacid 32972433
  • alias Pp1s56_263V6
  • alias Phypa_182417
  • alias Phpat.012G025800
  • uniprot A9S8T4

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
GOA Databaseintracellular protein transport
GO:0006890
IBA
IEA
GOA Databaseretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006890
IEA
InterProretrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891
IBA
GOA Databaseintra-Golgi vesicle-mediated transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G08520
GO:0030126
IBA
IEA
GOA DatabaseCOPI vesicle coat
GO:0030126
IEA
InterProCOPI vesicle coat
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0030663
IEA
GOA DatabaseCOPI-coated vesicle membrane
GO:0000139
IEA
GOA DatabaseGolgi membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022775 AP complex, mu/sigma subunit
IPR039652 Coatomer subunit zeta
IPR011012 Longin-like domain superfamily
Mapman id Description
22.2.1.1.4.4 Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.subunit zeta