Gene: Pp3c11_680
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_680
- Transcript Identifier Pp3c11_680V3.2
- Gene Type Coding gene
- Location Chr11 : 293665-294516 : positive
Gene Family Information
- ID HOM05D001754
- #Genes/#Species 370/99
- Phylogenetic origin
- ID ORTHO05D001839
- #Genes/#Species 348/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c11_680V3.2
- pacid 32957194
- alias Pp1s39_81V6
- alias Phypa_122343
- alias Phpat.011G002300
- uniprot A0A2K1JSX2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002181 | IBA | GOA Database | cytoplasmic translation | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G27770 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IBA | GOA Database | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT3G05560 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G27770 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G27770 |
| GO:0022625 | ISO | PLAZA Integrative Orthology | cytosolic large ribosomal subunit | AT1G02830 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G27770 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT3G05560 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G05560 |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.22 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL22 |