Gene: Pp3c11_17710
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_17710
- Transcript Identifier Pp3c11_17710V3.9
- Gene Type Coding gene
- Location Chr11 : 11709367-11712395 : negative
Gene Family Information
- ID HOM05D002942
- #Genes/#Species 234/98
- Phylogenetic origin
- ID ORTHO05D003270
- #Genes/#Species 233/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c11_17710V3.9
- pacid 32956734
- alias Pp1s80_72V6
- alias Phypa_130041
- alias Phpat.011G064100
- uniprot A0A2K1JV37
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT3G17609 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G11260 |
| GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT5G11260 |
| GO:0031539 | ISO | PLAZA Integrative Orthology | positive regulation of anthocyanin metabolic process | AT5G11260 |
| GO:0042753 | ISO | PLAZA Integrative Orthology | positive regulation of circadian rhythm | AT5G11260 |
| GO:0009740 | ISO | PLAZA Integrative Orthology | gibberellic acid mediated signaling pathway | AT5G11260 |
| GO:0009787 | ISO | PLAZA Integrative Orthology | regulation of abscisic acid-activated signaling pathway | AT5G11260 |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT3G17609 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT5G11260 |
| GO:0010218 | IBA | GOA Database | response to far red light | |
| GO:0010114 | IBA | GOA Database | response to red light | |
| GO:0010099 | IBA | GOA Database | regulation of photomorphogenesis | |
| GO:0010017 | IBA | GOA Database | red or far-red light signaling pathway | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G17609 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G17609 |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT5G11260 |
| GO:0000981 | IEA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000981 | IEA | InterPro | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus | |
| GO:0032993 | ISO | PLAZA Integrative Orthology | protein-DNA complex | AT5G11260 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |