Gene: Pp3c11_11230
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c11_11230
- Transcript Identifier Pp3c11_11230V3.8
- Gene Type Coding gene
- Location Chr11 : 7219150-7221520 : negative
Gene Family Information
- ID HOM05D000060
- #Genes/#Species 4064/97
- Phylogenetic origin
- ID ORTHO05D000428
- #Genes/#Species 946/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c11_11230V3.8
- pacid 32959662
- alias Phpat.011G041100
- uniprot A0A2K1JUB4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009755 | IBA | GOA Database | hormone-mediated signaling pathway | |
| GO:0045893 | IBA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT3G03760 |
| GO:0048830 | ISO | PLAZA Integrative Orthology | adventitious root development | Os03g0149100 |
| GO:0009753 | ISO | PLAZA Integrative Orthology | response to jasmonic acid | AT3G03760 |
| GO:0010089 | ISO | PLAZA Integrative Orthology | xylem development | AT2G45420 |
| GO:0010199 | ISO | PLAZA Integrative Orthology | organ boundary specification between lateral organs and the meristem | AT4G00220 |
| GO:0009867 | ISO | PLAZA Integrative Orthology | jasmonic acid mediated signaling pathway | AT3G03760 |
| GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT3G58190 |
| GO:1990110 | ISO | PLAZA Integrative Orthology | callus formation | AT3G58190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G45420 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | Os03g0149100 |
| GO:1990841 | ISO | PLAZA Integrative Orthology | promoter-specific chromatin binding | AT2G42430 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G42430 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004883 | Lateral organ boundaries, LOB |
| Mapman id | Description |
|---|---|
| 15.5.24 | RNA biosynthesis.transcriptional regulation.transcription factor (AS2/LOB) |