Gene: Potri.019G100800

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.019G100800
  • Transcript Identifier Potri.019G100800.8
  • Gene Type Coding gene
  • Location Chr19 : 13714229-13715020 : positive

Gene Family Information

  • ID HOM05D000463
  • #Genes/#Species 1137/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.019G100800.v4.1
  • pacid 42774354
  • synonym POPTR_0019s13210

Descriptions

  • Description PTHR12313//PTHR12313:SF5 - RNF5 // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0032527
ISO
PLAZA Integrative Orthologyprotein exit from endoplasmic reticulum AT4G03510
GO:0032940
ISO
PLAZA Integrative Orthologysecretion by cell AT4G03510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT4G28270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G28270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
InterProendoplasmic reticulum
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT4G03510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR045103 E3 ubiquitin-protein ligase RNF5/RNF185-like
Mapman id Description
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase