Gene: Potri.008G172800

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.008G172800
  • Transcript Identifier Potri.008G172800.2
  • Gene Type Coding gene
  • Location Chr08 : 11937873-11940248 : negative

Gene Family Information

  • ID HOM05D002303
  • #Genes/#Species 294/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.008G172800.v4.1
  • pacid 42806933
  • synonym eugene3.00081601

Descriptions

  • Description K12816 - pre-mRNA-processing factor 17 (CDC40, PRP17)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G10580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IEA
InterProcatalytic step 2 spliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR032847 Pre-mRNA-processing factor 17
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
16.2.5.2.11 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component Prp17