Gene: Potri.005G228500

General Information

Structural Information

Species Populus trichocarpa
Gene Identifier Potri.005G228500
Transcript Identifier Potri.005G228500.1
Gene Type Coding gene
Location Chr05 : 22836780-22838432 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000472
#Genes/#Species 1118/100
Phylogenetic origin

ID ORTHO05D000344
#Genes/#Species 1079/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Potri.005G228500.v4.1
pacid 42803378
synonym POPTR_0005s25010

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR16517//PTHR16517:SF40 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 11-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	ISO	PLAZA Integrative Orthology	regulation of transcription, DNA-templated	AT1G47270
GO:0009555	ISO	PLAZA Integrative Orthology	pollen development	AT1G47270

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G47270

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001810	F-box domain
IPR025659	Tubby-like, C-terminal
IPR036047	F-box-like domain superfamily
IPR000007	Tubby, C-terminal

Mapman id	Description
15.5.21	RNA biosynthesis.transcriptional regulation.transcription factor (TUB)