Gene: Potri.005G170300

General Information

Structural Information

Species Populus trichocarpa
Gene Identifier Potri.005G170300
Transcript Identifier Potri.005G170300.2
Gene Type Coding gene
Location Chr05 : 17417761-17419635 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Potri.005G170300.v4.1
pacid 42805194

Descriptions

Short descriptions
Ortholog descriptions

Description PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT4G18520
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT4G18520

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G18520

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G18520

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.39	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (SEL1/PDM1)