Gene: Potri.001G390200
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.001G390200
- Transcript Identifier Potri.001G390200.1
- Gene Type Coding gene
- Location Chr01 : 41276460-41280626 : positive
Gene Family Information
- ID HOM05D000472
- #Genes/#Species 1118/100
- Phylogenetic origin
- ID ORTHO05D000344
- #Genes/#Species 1079/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.001G390200.v4.1
- pacid 42789714
- synonym POPTR_0001s40080
Descriptions
- Description PTHR16517//PTHR16517:SF35 - TUBBY-RELATED // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G53320 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G53320 |
| GO:0009620 | ISO | PLAZA Integrative Orthology | response to fungus | AT1G53320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G53320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G53320 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G53320 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G53320 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT1G53320 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.21 | RNA biosynthesis.transcriptional regulation.transcription factor (TUB) |