Gene: Potri.001G319900
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.001G319900
- Transcript Identifier Potri.001G319900.2
- Gene Type Coding gene
- Location Chr01 : 32955321-32956560 : positive
Gene Family Information
- ID HOM05D000142
- #Genes/#Species 2580/100
- Phylogenetic origin
- ID ORTHO05D000124
- #Genes/#Species 1824/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.001G319900.v4.1
- pacid 42787982
- synonym POPTR_0323s00200
Descriptions
- Description PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G18630 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G18630 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT1G18630 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT1G18630 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G18630 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.11.3.3.2 | RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM) |