Gene: PGSC0003DMG402029444
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG402029444
- Transcript Identifier PGSC0003DMT400075703
- Gene Type Coding gene
- Location ST4.03ch04 : 3258008-3258853 : negative
Gene Family Information
- ID HOM05D000624
- #Genes/#Species 915/95
- Phylogenetic origin
- ID ORTHO05D000495
- #Genes/#Species 860/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37472879
- id PGSC0003DMG402029444.v4.03
- uniprot H1ZN95
Descriptions
- Description GAGA-binding transcriptional activator BBR/BPC1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IBA IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009723 | IBA | GOA Database | response to ethylene | |
| GO:0050793 | ISO | PLAZA Integrative Orthology | regulation of developmental process | AT1G14685 |
| GO:1901002 | ISO | PLAZA Integrative Orthology | positive regulation of response to salt stress | AT1G14685 |
| GO:0080157 | ISO | PLAZA Integrative Orthology | regulation of plant-type cell wall organization or biogenesis | AT1G14685 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IBA IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0043565 | IBA | GOA Database | sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G14685 |
| GO:0000987 | ISO | PLAZA Integrative Orthology | cis-regulatory region sequence-specific DNA binding | AT1G14685 |
| GO:1990837 | ISO | PLAZA Integrative Orthology | sequence-specific double-stranded DNA binding | AT1G14685 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR010409 | GAGA-binding transcriptional activator |
| Mapman id | Description |
|---|---|
| 15.5.32 | RNA biosynthesis.transcriptional regulation.transcription factor (BBR/BPC) |