Gene: PGSC0003DMG400031044
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400031044
- Transcript Identifier PGSC0003DMT400079714
- Gene Type Coding gene
- Location ST4.03ch03 : 48926055-48928935 : positive
Gene Family Information
- ID HOM05D000119
- #Genes/#Species 2812/100
- Phylogenetic origin
- ID ORTHO05D000054
- #Genes/#Species 2725/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37460058
- id PGSC0003DMG400031044.v4.03
- uniprot M1D2B8
Descriptions
- Description MYB transcription factor
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IEA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0006355 | IBA | GOA Database | regulation of transcription, DNA-templated | |
| GO:1902074 | ISO | PLAZA Integrative Orthology | response to salt | AT1G17950 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G17950 |
| GO:1901347 | ISO | PLAZA Integrative Orthology | negative regulation of secondary cell wall biogenesis | AT1G17950 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT1G17950 |
| GO:1901348 | ISO | PLAZA Integrative Orthology | positive regulation of secondary cell wall biogenesis | AT1G17950 |
| GO:2000652 | ISO | PLAZA Integrative Orthology | regulation of secondary cell wall biogenesis | AT1G73410 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G17950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73410 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G73410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |