Gene: PGSC0003DMG400030257
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400030257
- Transcript Identifier PGSC0003DMT400077781
- Gene Type Coding gene
- Location ST4.03ch03 : 6274027-6276396 : positive
Gene Family Information
- ID HOM05D000349
- #Genes/#Species 1356/100
- Phylogenetic origin
- ID ORTHO05D395647
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37464060
- id PGSC0003DMG400030257.v4.03
- uniprot M1CYW7
Descriptions
- Description Alpha tubulin 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000278 | IBA | GOA Database | mitotic cell cycle | |
| GO:0000226 | IBA | GOA Database | microtubule cytoskeleton organization | |
| GO:0007017 | IEA | GOA Database | microtubule-based process | |
| GO:0007017 | IEA | InterPro | microtubule-based process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005200 | IBA IEA | GOA Database | structural constituent of cytoskeleton | |
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0005525 | IBA IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005874 | IBA IEA | GOA Database | microtubule | |
| GO:0005874 | IEA | InterPro | microtubule |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR000217 | Tubulin |
| IPR023123 | Tubulin, C-terminal |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR002452 | Alpha tubulin |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |