Gene: PGSC0003DMG400028656

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400028656
  • Transcript Identifier PGSC0003DMT400073758
  • Gene Type Coding gene
  • Location ST4.03ch11 : 6978554-6982962 : negative

Gene Family Information

  • ID HOM05D002415
  • #Genes/#Species 281/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37464321
  • id PGSC0003DMG400028656.v4.03
  • uniprot M1CSM1

Descriptions

  • Description Histone-lysine N-methyltransferase ATXR6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IBA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0070734
IEA
GOA Databasehistone H3-K27 methylation
GO:0051726
IEA
GOA Databaseregulation of cell cycle
GO:0009294
IEA
GOA DatabaseDNA mediated transformation
GO:0009555
IEA
GOA Databasepollen development
GO:0006275
IEA
GOA Databaseregulation of DNA replication
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT5G24330

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0042393
IBA
GOA Databasehistone binding
GO:0046976
IEA
GOA Databasehistone methyltransferase activity (H3-K27 specific)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger
IPR001214 SET domain
Mapman id Description
12.3.3.5 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-IV histone methyltransferase (ATXR)