Gene: PGSC0003DMG400027958

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400027958
  • Transcript Identifier PGSC0003DMT400071859
  • Gene Type Coding gene
  • Location ST4.03ch06 : 36434346-36439336 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37450552
  • id PGSC0003DMG400027958.v4.03
  • uniprot M1CPF1

Descriptions

  • Description Dead box ATP-dependent RNA helicase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003724
IBA
IEA
GOA DatabaseRNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
GOA Databasenucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR035979 RNA-binding domain superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR012562 GUCT
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated