Gene: PGSC0003DMG400022423

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400022423
  • Transcript Identifier PGSC0003DMT400057760
  • Gene Type Coding gene
  • Location ST4.03ch02 : 34474495-34480893 : positive

Gene Family Information

  • ID HOM05D001771
  • #Genes/#Species 368/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37426160
  • id PGSC0003DMG400022423.v4.03
  • uniprot M1C1L6

Descriptions

  • Description WD-40 repeat family protein / katanin p80 subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007019
IBA
GOA Databasemicrotubule depolymerization
GO:0051510
ISO
PLAZA Integrative Orthologyregulation of unidimensional cell growth AT1G61210
GO:0051013
ISO
PLAZA Integrative Orthologymicrotubule severing AT1G61210
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G61210
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G61210
GO:0043622
ISO
PLAZA Integrative Orthologycortical microtubule organization AT1G61210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008017
IEA
GOA Databasemicrotubule binding
GO:0008017
IEA
InterPromicrotubule binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G61210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005737
IEA
GOA Databasecytoplasm
GO:0008352
IBA
GOA Databasekatanin complex
GO:0015630
ISO
PLAZA Integrative Orthologymicrotubule cytoskeleton AT1G61210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028021 Katanin p80 subunit, C-terminal
Mapman id Description
35.1 not assigned.annotated