Gene: PGSC0003DMG400022349

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400022349
Transcript Identifier PGSC0003DMT400057540
Gene Type Coding gene
Location ST4.03ch02 : 35096912-35099341 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pacid 37424874
id PGSC0003DMG400022349.v4.03
uniprot M1C197

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat-containing protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0090305	IEA	GOA Database	nucleic acid phosphodiester bond hydrolysis
GO:0016556	IEA	GOA Database	mRNA modification

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004519	IEA	GOA Database	endonuclease activity
GO:0003729	IEA	GOA Database	mRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	IEA	GOA Database	chloroplast

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.45	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (CRR22)