Gene: PGSC0003DMG400020544

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400020544
  • Transcript Identifier PGSC0003DMT400052942
  • Gene Type Coding gene
  • Location ST4.03ch06 : 3115913-3116446 : negative

Gene Family Information

  • ID HOM05D000157
  • #Genes/#Species 2371/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37454038
  • id PGSC0003DMG400020544.v4.03
  • uniprot M1BU60

Descriptions

  • Description RING-H2 finger protein ATL3F
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901000
IEA
GOA Databaseregulation of response to salt stress
GO:1903426
IEA
GOA Databaseregulation of reactive oxygen species biosynthetic process
GO:0071470
IEA
GOA Databasecellular response to osmotic stress
GO:0030100
IEA
GOA Databaseregulation of endocytosis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
GOA Databaseubiquitin protein ligase binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005768
IEA
GOA Databaseendosome
GO:0005798
IEA
GOA DatabaseGolgi-associated vesicle
GO:0005769
IEA
GOA Databaseearly endosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase