Gene: PGSC0003DMG400019334

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400019334
  • Transcript Identifier PGSC0003DMT400049768
  • Gene Type Coding gene
  • Location ST4.03ch09 : 48706272-48710325 : positive

Gene Family Information

  • ID HOM05D001048
  • #Genes/#Species 579/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37454923
  • id PGSC0003DMG400019334.v4.03
  • uniprot M1BPA8

Descriptions

  • Description DNA binding protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2000031
ISO
PLAZA Integrative Orthologyregulation of salicylic acid mediated signaling pathway AT4G02590
GO:0031347
ISO
PLAZA Integrative Orthologyregulation of defense response AT4G02590
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT2G24260
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT2G24260
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT2G24260
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G24260
GO:0009567
ISO
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G02590
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT2G24260
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT2G24260
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G24260
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24260
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)