Gene: PGSC0003DMG400019025
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400019025
- Transcript Identifier PGSC0003DMT400048964
- Gene Type Coding gene
- Location ST4.03ch12 : 7848707-7852363 : negative
Gene Family Information
- ID HOM05D000578
- #Genes/#Species 962/99
- Phylogenetic origin
- ID ORTHO05D000422
- #Genes/#Species 952/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37449293
- id PGSC0003DMG400019025.v4.03
- uniprot M1BN32
Descriptions
- Description Zinc finger protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IBA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0009640 | IBA | GOA Database | photomorphogenesis | |
| GO:0015995 | ISO | PLAZA Integrative Orthology | chlorophyll biosynthetic process | AT1G78600 |
| GO:0009718 | ISO | PLAZA Integrative Orthology | anthocyanin-containing compound biosynthetic process | AT1G78600 |
| GO:0010099 | ISO | PLAZA Integrative Orthology | regulation of photomorphogenesis | AT1G78600 |
| GO:0009641 | ISO | PLAZA Integrative Orthology | shade avoidance | AT1G78600 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G78600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G78600 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G78600 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA | GOA Database | nucleus | |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT1G78600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000315 | B-box-type zinc finger |
| Mapman id | Description |
|---|---|
| 15.5.1.1 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-DBB) |