Gene: PGSC0003DMG400018493

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400018493
  • Transcript Identifier PGSC0003DMT400047586
  • Gene Type Coding gene
  • Location ST4.03ch08 : 3855503-3862236 : negative

Gene Family Information

  • ID HOM05D001165
  • #Genes/#Species 531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37470139
  • id PGSC0003DMG400018493.v4.03
  • uniprot M1BL20

Descriptions

  • Description Cytosine-specific methyltransferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090116
IEA
GOA DatabaseC-5 methylation of cytosine
GO:0032259
IEA
GOA Databasemethylation
GO:0034605
IEA
GOA Databasecellular response to heat
GO:0010426
IEA
GOA DatabaseDNA methylation on cytosine within a CHH sequence

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003886
IEA
GOA DatabaseDNA (cytosine-5-)-methyltransferase activity
GO:0003682
ISO
PLAZA Homology (enrichment)chromatin binding HOM05D001165

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023780 Chromo domain
IPR001525 C-5 cytosine methyltransferase
IPR000953 Chromo/chromo shadow domain
IPR016197 Chromo-like domain superfamily
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT)