Gene: PGSC0003DMG400013975
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400013975
- Transcript Identifier PGSC0003DMT400036329
- Gene Type Coding gene
- Location ST4.03ch05 : 42894458-42898422 : positive
Gene Family Information
- ID HOM05D000066
- #Genes/#Species 3967/96
- Phylogenetic origin
- ID ORTHO05D000055
- #Genes/#Species 2700/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pacid 37444896
- id PGSC0003DMG400013975.v4.03
- uniprot M1B3H5
Descriptions
- Description Xyloglucan endotransglycosylase/hydrolase XTH-6
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071365 | ISO | PLAZA Integrative Orthology | cellular response to auxin stimulus | AT4G30290 |
| GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT4G30290 |
| GO:0010411 | IEA | GOA Database | xyloglucan metabolic process | |
| GO:0010411 | IEA | InterPro | xyloglucan metabolic process | |
| GO:0006073 | IEA | GOA Database | cellular glucan metabolic process | |
| GO:0006073 | IEA | InterPro | cellular glucan metabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0042546 | IEA | GOA Database | cell wall biogenesis | |
| GO:0042546 | IEA | InterPro | cell wall biogenesis | |
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0033946 | ISO | PLAZA Integrative Orthology | xyloglucan-specific endo-beta-1,4-glucanase activity | AT4G30280 |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016762 | IEA | GOA Database | xyloglucan:xyloglucosyl transferase activity | |
| GO:0016762 | IEA | InterPro | xyloglucan:xyloglucosyl transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G30280 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G57530 |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0005618 | IEA | InterPro | cell wall | |
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0048046 | IEA | InterPro | apoplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.2.4 | Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase |