Gene: PGSC0003DMG400011399

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400011399
  • Transcript Identifier PGSC0003DMT400029648
  • Gene Type Coding gene
  • Location ST4.03ch09 : 52575767-52579980 : negative

Gene Family Information

  • ID HOM05D002098
  • #Genes/#Species 318/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37458572
  • id PGSC0003DMG400011399.v4.03
  • uniprot M1AT69

Descriptions

  • Description Ubiquitin-protein ligase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0042742
IEA
GOA Databasedefense response to bacterium
GO:0080021
IEA
GOA Databaseresponse to benzoic acid
GO:0009626
IEA
GOA Databaseplant-type hypersensitive response
GO:0009627
IEA
GOA Databasesystemic acquired resistance
GO:0009697
IEA
GOA Databasesalicylic acid biosynthetic process
GO:0009751
IEA
GOA Databaseresponse to salicylic acid
GO:0010167
IEA
GOA Databaseresponse to nitrate
GO:0010337
IEA
GOA Databaseregulation of salicylic acid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G02860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033326 E3 ubiquitin-protein ligase BAH1
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
25.3.3.2 Nutrient uptake.phosphorus assimilation.phosphate homeostasis.E3 ubiquitin ligase (NLA)