Gene: PGSC0003DMG400007825

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400007825
  • Transcript Identifier PGSC0003DMT400020238
  • Gene Type Coding gene
  • Location ST4.03ch12 : 2165336-2170062 : positive

Gene Family Information

  • ID HOM05D002836
  • #Genes/#Species 244/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37447982
  • id PGSC0003DMG400007825.v4.03
  • uniprot M1AD58

Descriptions

  • Description Translation initiation factor
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
IEA
GOA Databaseembryo development ending in seed dormancy
GO:0071215
IEA
GOA Databasecellular response to abscisic acid stimulus
GO:1902626
IBA
GOA Databaseassembly of large subunit precursor of preribosome
GO:0000054
IBA
GOA Databaseribosomal subunit export from nucleus
GO:0000460
IBA
GOA Databasematuration of 5.8S rRNA
GO:0000470
IBA
GOA Databasematuration of LSU-rRNA
GO:0042256
IEA
GOA Databasemature ribosome assembly
GO:0042256
IEA
InterPromature ribosome assembly
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0006412
IEA
GOA Databasetranslation
GO:0006413
IEA
GOA Databasetranslational initiation
GO:0042273
IEA
GOA Databaseribosomal large subunit biogenesis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IEA
GOA Databaseribosome binding
GO:0043022
IEA
InterProribosome binding
GO:0043023
IBA
IEA
GOA Databaseribosomal large subunit binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
IEA
GOA Databasecytosol
GO:0030687
IBA
GOA Databasepreribosome, large subunit precursor
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002769 Translation initiation factor IF6
Mapman id Description
17.1.2.2.3.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6)