Gene: PGSC0003DMG400006556

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400006556
Transcript Identifier PGSC0003DMT400016766
Gene Type Coding gene
Location ST4.03ch01 : 41936893-41942126 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001668
#Genes/#Species 387/98
Phylogenetic origin

ID ORTHO05D001693
#Genes/#Species 369/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37437683
id PGSC0003DMG400006556.v4.03
uniprot M1A844

Descriptions

Short descriptions
Ortholog descriptions

Description Sterol desaturase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008610	IEA	GOA Database	lipid biosynthetic process
GO:0008610	IEA	InterPro	lipid biosynthetic process
GO:0009640	ISO	PLAZA Integrative Orthology	photomorphogenesis	AT1G69640
GO:0046520	ISO	PLAZA Integrative Orthology	sphingoid biosynthetic process	AT1G69640

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005506	IEA	GOA Database	iron ion binding
GO:0005506	IEA	InterPro	iron ion binding
GO:0016491	IBA IEA	GOA Database	oxidoreductase activity
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0000170	ISO	PLAZA Integrative Orthology	sphingosine hydroxylase activity	AT1G69640

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IBA IEA	GOA Database	membrane
GO:0005789	IBA	GOA Database	endoplasmic reticulum membrane
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT1G69640
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT1G69640

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006694	Fatty acid hydroxylase

Mapman id	Description
5.4.4	Lipid metabolism.sphingolipid biosynthesis.sphingobase hydroxylase (SBH)