Gene: PGSC0003DMG400003432

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400003432
Transcript Identifier PGSC0003DMT400008831
Gene Type Coding gene
Location ST4.03ch06 : 12659474-12660545 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000066
#Genes/#Species 3967/96
Phylogenetic origin

ID ORTHO05D001993
#Genes/#Species 329/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

pacid 37453418
id PGSC0003DMG400003432.v4.03
uniprot M0ZV58

Descriptions

Short descriptions
Ortholog descriptions

Description Xyloglucan endotransglucosylase-hydrolase XTH6

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006073	IEA	GOA Database	cellular glucan metabolic process
GO:0006073	IEA	InterPro	cellular glucan metabolic process
GO:0005975	IEA	GOA Database	carbohydrate metabolic process
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0010411	ISO	PLAZA Homology (enrichment)	xyloglucan metabolic process	HOM05D000066
GO:0042546	ISO	PLAZA Homology (enrichment)	cell wall biogenesis	HOM05D000066

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016762	IEA	GOA Database	xyloglucan:xyloglucosyl transferase activity
GO:0016762	IEA	InterPro	xyloglucan:xyloglucosyl transferase activity
GO:0004553	IEA	GOA Database	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016740	IEA	GOA Database	transferase activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	IEA	GOA Database	cell wall
GO:0005618	IEA	InterPro	cell wall
GO:0048046	IEA	GOA Database	apoplast
GO:0048046	IEA	InterPro	apoplast
GO:0005576	IEA	GOA Database	extracellular region

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR010713	Xyloglucan endo-transglycosylase, C-terminal
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR044791	Beta-glucanase/XTH
IPR000757	Glycoside hydrolase family 16

Mapman id	Description
35.1	not assigned.annotated